UPDATE NOMENCLATURE

The immunogenomics data analysis working group is developing software intended to make the management and analysis of immunogenomic data simpler, faster, and more consistent across studies.

Toward this end, we have developed Update NomenCLature (UNCL), which will translate non-colon-delimited HLA allele names (e.g., A*01010101) to their colon-delimited counterparts (e.g., A*01:01:01:01), and will update allele names that have changed as the result of a nomenclature change (i.e., DPB1*0502 will be translated to DPB1*104:01, and HLA-C allele prefixes will be changed from Cw* to C*).

In addition to translating whole allele names, UNCL can translate allele-names that have been truncated to two, four, or six digits (e.g., A*01, A*0101, or A*010101) to their colon-delimited counterparts truncated to the appropriate number of polymorphic domains (e.g., A*01, A*01:01, or A*01:01:01).

UNCL uses the translation source table available at http://hla.alleles.org/data/txt/Nomenclature_2009.txt to perform translations; this file can also be obtained via FTP from ftp://ftp.ebi.ac.uk/pub/databases/imgt/mhc/hla/.

UNCL users are encouraged to join the UNCL User Mailing List for news and notifications about the tool. (If you click this link to send an email, be sure to delete the "_NO_SPAM" from the end of the email address.) Your contact information will be used only for UNCL-related news, and will not be shared.

System Requirements
UNCL is a web-based implementation of a script written in the R statistical computing environment and requires only an internet connection and a modern javascript-enabled web-browser (e.g., Internet Explorer 8, Firefox 3, or Safari 4).

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